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dishevelled.org worm-plot-cytoscape3-app 1.0-SNAPSHOT :: Downloads | Repository | Javadocs | Checkstyle | Test coverage | Changes

Summary

dishevelled.org worm-plot-cytoscape3-app provides a Cytoscape 3 [1] app for creating "worm plot" DNA sequence self-similarity graphs. The Worm plot Cytoscape 3 app requires java version 1.6 or later, Cytoscape version 3.0 or later, and a local installation of NCBI BLAST [2] version 2.2.29 or later.

References

[1] Cytoscape
> http://cytoscape.org

[2] NCBI BLAST: Basic Local Alignment Search Tool
> http://blast.ncbi.nlm.nih.gov

Acknowledgements

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