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dishevelled.org variation-cytoscape3-app 1.0-SNAPSHOT :: Downloads | Repository | Javadocs | Checkstyle | Test coverage | Changes

Summary

dishevelled.org variation-cytoscape3-app provides a Cytoscape 3 [1] app for integrating variation and variation consequence data on biological networks. The Variation Cytoscape 3 app requires java version 1.6 or later and Cytoscape version 3.0 or later.

The Variation Cytoscape 3 app was presented in a poster at the 2014 Intelligent Systems for Molecular Biology (ISMB) Network Biology (NetBio) SIG [2]. The presentation is available in Portable Document Format (.pdf) format.

> NetBio2014.pdf

The Variation Cytoscape 3 app was also presented in a poster at the 2013 Cold Spring Harbor Laboratory conference on Genome Informatics [3] titled "Visualizing consequences of genetic variation in biological networks" by L.F. Tang et al. The presentation and supplementary slides are available in OpenDocument presentation (.odp) and PowerPoint (.pptx) formats.

> GenomeInformatics2013.odp
> GenomeInformatics2013.pptx
> variation-cytoscape3-app.odp
> variation-cytoscape3-app.pptx

References

[1] Cytoscape
> http://cytoscape.org

[2] 2014 Intelligent Systems for Molecular Biology Network Biology SIG
> http://nrnb.org/netbiosig/

[3] 2013 Cold Spring Harbor Laboratory conference on Genome Informatics
> http://meetings.cshl.edu/meetings/2013/info13.shtml

Acknowledgements

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